PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP018102.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family NAC
Protein Properties Length: 251aa    MW: 28417.1 Da    PI: 8.6021
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP018102.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM86.84e-27129445128
          NAM  45 wdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk..kgelvglkktLvfykgrapkgektdWvmheyrl 128
                   +     + ++ke+yfF++r +ky+++ r+nr+t sg+Wkatg dk+++s    +e +glkk+Lv+y+g+a kg+ktdW+m+e+rl
  PCP018102.1  12 LEVS---SLGDKECYFFCRRGRKYRNSIRPNRVTGSGFWKATGIDKAIYSVkdPHECIGLKKSLVYYRGSAGKGTKTDWMMNEFRL 94 
                  4443...34789*************************************98555667***************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 251 aa     Download sequence    
MCSFKVSVYS PLEVSSLGDK ECYFFCRRGR KYRNSIRPNR VTGSGFWKAT GIDKAIYSVK  60
DPHECIGLKK SLVYYRGSAG KGTKTDWMMN EFRLPPNGHG KTTKFLNAKV DVTQEEAEVW  120
TLCRIFKRIP SYKKYTPDCK ESTTKQNPTD SSSKTCSLES GSYCSEIHFG LKDSVIQRIE  180
RPKPAHVDEA NQWLVAVGEL DSISYPTPFS TTYSTLTNLS DGDFFTNGNW DELRPVVQLA  240
VDPSSQVYDC R
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G43000.17e-56NAC family protein