PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP018168.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family E2F/DP
Protein Properties Length: 358aa    MW: 39792.7 Da    PI: 6.0651
Description E2F/DP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP018168.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1E2F_TDP75.84.2e-2489177271
      E2F_TDP   2 keksLrlltqkflklleksee.givtlne......vakeLvse................dvknkrRRiYDilNVLealnliekkekneirwkg 71 
                  ++++Lr++++k   ++ek+e+ g++t+ne      va+eLv+e                d+kn+rRR+YD+lNVL+a+++i+k +k+ei+wkg
  PCP018168.1  89 NGRGLRQFSMK---VCEKVESkGRTTYNEvgwflqVADELVAEfadpsnavtspdqqqdDEKNIRRRVYDALNVLMAMDIISK-DKKEIQWKG 177
                  789********...*****999******833333369999999****************************************.*******98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 358 aa     Download sequence    
MGTRSQQQPG RERVGQDDDD MAGGQSVSMS GSVGSPSSRS EQTMATPVGD NSFLRLNHPD  60
VHGDDAGSQG AVGSKKKKRG QRAVAGDKNG RGLRQFSMKV CEKVESKGRT TYNEVGWFLQ  120
VADELVAEFA DPSNAVTSPD QQQDDEKNIR RRVYDALNVL MAMDIISKDK KEIQWKGLPR  180
TSLNDIEELK TERMGLRNRI EKKAAYLQEL EEQYVGLQNL IQRNEQLYHS GDAPSGGVAL  240
PFILVQASFL LKTRPHATVE VEISEDMQLV HFDFNSTPFE LHDDNYVLKA MKFCNRQQGD  300
DATQNLIVDG GEGCSMSDMY QPQIPLSSML NTPIRPPPMS PPLPGILKAR VKHEHHGQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G03415.11e-143E2F/DP family protein