PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP018237.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

bHLH

Protein Properties

Length: 454aa MW: 50607.8 Da PI: 6.9

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP018237.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	23	1.4e-07	326	353	4	30
HHHHHHHHHHHHHHHHHHHHHCTSCC.C CS HLH 4 ahnerErrRRdriNsafeeLrellPk.a 30 +h e+Er+RR+++N++f Lr+++P+ + PCP018237.1 326 NHVEAERQRREKLNHRFYVLRSVVPNvS 353 799**********************944 PP

Sequence ? help Back to Top
Protein Sequence Length: 454 aa Download sequence
MEEIISSCSP PTFCQETSFT FQQRLQFIVQ KRSEWWVYSI FWQASKGSIT DQVSLSWAGG 60 HFWNTHDHLA SKRSSGVINS YQPKFGFSNG ERSKVINREV EDLLHDDIVD LDMRLVDRED 120 VTDSEWFYFY TLSLTQSFSA SQGNNSKNIV GRAFGSGGFV WLAGDHDFQF YECERVKEAR 180 MHGIQTLVCI ATPCGVLELA SLDVIKEDWG LVHLSKSLFG LDGNINMNNN NKKKLSKQQT 240 TRDGNVLVPI LENGLFSAAQ KELIRQDQGG SKNEDAPINL GESSPETPSD SVGNFTSENT 300 ENMTRLKKRG RSSNHGAASR DLQLLNHVEA ERQRREKLNH RFYVLRSVVP NVSKMDRAAA 360 AAVEVDVKIM GSDVIIRVQC PDEDYPYAKL MNALKGLGLQ VYHASISSVK ELMVQDVVAR 420 LPYGFTGLQY NCGKGGGSNS SGRGGSGGRF VFQG

Sequence ? help Back to Top

Protein Sequence Length: 454 aa Download sequence

MEEIISSCSP PTFCQETSFT FQQRLQFIVQ KRSEWWVYSI FWQASKGSIT DQVSLSWAGG  60
HFWNTHDHLA SKRSSGVINS YQPKFGFSNG ERSKVINREV EDLLHDDIVD LDMRLVDRED  120
VTDSEWFYFY TLSLTQSFSA SQGNNSKNIV GRAFGSGGFV WLAGDHDFQF YECERVKEAR  180
MHGIQTLVCI ATPCGVLELA SLDVIKEDWG LVHLSKSLFG LDGNINMNNN NKKKLSKQQT  240
TRDGNVLVPI LENGLFSAAQ KELIRQDQGG SKNEDAPINL GESSPETPSD SVGNFTSENT  300
ENMTRLKKRG RSSNHGAASR DLQLLNHVEA ERQRREKLNH RFYVLRSVVP NVSKMDRAAA  360
AAVEVDVKIM GSDVIIRVQC PDEDYPYAKL MNALKGLGLQ VYHASISSVK ELMVQDVVAR  420
LPYGFTGLQY NCGKGGGSNS SGRGGSGGRF VFQG

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	306	312	LKKRGRS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G46830.1	4e-38	bHLH family protein