PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP018295.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

DBB

Protein Properties

Length: 301aa MW: 32868.9 Da PI: 6.3638

Description

DBB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP018295.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	21.6	4.4e-07	4	46	5	40
zf-B_box 5 kCpeHeekelqlfCedCqqllCedClleeHkg.......Htvv 40 C+ +++ ++ fC+ ++ lC+ C H+ H+++ PCP018295.1 4 QCDVCNKDDASVFCTADEAALCDACDHRVHHAnklaskhHRFS 46 7****99******************64458888877665 PP
2	zf-B_box	27.4	7e-09	56	93	4	39
zf-B_box 4 rkCpeHeekelqlfCedCqqllCedClleeHkg..Htv 39 ++C+ ++e ++ lfC++++ lC++C l +H+ Ht+ PCP018295.1 56 PVCDICQERRAFLFCQQDRAILCRECDLPIHNAneHTL 93 79*****************************7689987 PP

Sequence ? help Back to Top
Protein Sequence Length: 301 aa Download sequence
MKIQCDVCNK DDASVFCTAD EAALCDACDH RVHHANKLAS KHHRFSLIHP SSKEFPVCDI 60 CQERRAFLFC QQDRAILCRE CDLPIHNANE HTLKHNRFLL TGIKLSATSA LYESPPPPTV 120 ATASSETAAT DLKKHQPLTK ESVSTASPPI SNPNPPPVAA KISTSTAAVN KGGENLVGAT 180 SSISEYLIET LPGWHVEDFL DFSSAPFGFS KADNDMMLPF SDAYPESNLN SFSSENMGMW 240 VPQAPQAPPH QYSQVGGGFA GFKETKEGTN MNASNRLWMD DGFTVPQISP PSLGSKRFRP 300 F

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G75540.1	6e-90	DBB family protein