PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP018304.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family ERF
Protein Properties Length: 457aa    MW: 49327.5 Da    PI: 6.4273
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP018304.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP264.32.4e-20227276255
          AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkleg 55 
                  +y+GVr+++ +g+W+AeIrdp     +  +r++lg+f+tae Aa+a+++a+++++g
  PCP018304.1 227 RYRGVRQRP-WGKWAAEIRDP-----HraARVWLGTFDTAEAAARAYDEAALRFRG 276
                  7********.**********7.....338*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 457 aa     Download sequence    
MEVANQKSSG GGGQHDRFGS QNDSTDVNAV NIDNINYGGV GLESPPPYQQ QHVSPSTPTM  60
FLGYSRATEM SAMVSALTHV VSGQRGSDSW GHIGSGGVTS SFGQLYSSSF PSASPLSAAF  120
SSSASPASNN WVGQKRGREE DLDSASALAQ TQFMESGNRA FRGGYSDYRG TQSDSPSGGA  180
SATVTEESTN FSTAPTTATV SVTTALPTTP SSTESVSFEE TGERKRRYRG VRQRPWGKWA  240
AEIRDPHRAA RVWLGTFDTA EAAARAYDEA ALRFRGNRAK LNFPENVRLV QPPPPPPPTL  300
QTFNSNSRPT QYAQPLQPPL PLPQPPQQQL YHSQQAFQPS SDLLRDYFDY SQLLQSSADF  360
HPQQQHQQQP SSLLQQMYYN SQLASLQSSI LQPASSTTPS SALPSSASSS ASFPLFFSEQ  420
NQQLGFFRQP QNPNQGGSSD FQAPSWSHSG NDPSSSS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G50080.13e-25ERF family protein