PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP018325.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family bHLH
Protein Properties Length: 241aa    MW: 27409 Da    PI: 7.086
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP018325.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH20.49.6e-0789134653
                  HHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHH CS
          HLH   6 nerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIks 53 
                    +Er+RR+ +    + Lr+llP  +    ++K s  e   +Av+YI++
  PCP018325.1  89 RDNERQRRQLMAVLNSSLRSLLPCeL---IKGKRSITEHMNEAVNYINH 134
                  679*********************88...******************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 241 aa     Download sequence    
MFPNSYHHDQ SKDLVFQTSF IDDSHHNDMM QVEDLMRGHE VFPEEKNPSR NKIMGKGKQR  60
QQHMILSPNS SNTGENNSDG KTERKIVRRD NERQRRQLMA VLNSSLRSLL PCELIKGKRS  120
ITEHMNEAVN YINHTKAKIE ELNAKREKIK KLYECDSKDF GLENESSGHD FLKCSIMVHP  180
TCLGAVEVVI SSSCGEQEGL PLSGVLKVLL AEGLSVVECA STRVNESSFH NIQCEVYTRS  240
F
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G51790.13e-34bHLH family protein