PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP018326.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family bHLH
Protein Properties Length: 219aa    MW: 24222.7 Da    PI: 9.5863
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP018326.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH42.98.6e-144597155
                 CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
          HLH  1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
                 ++++h e+E++RR+++ + +  Lr++lP  +   ++K s a+   +Av+YIk+Lq
  PCP018326.1 45 KKMMHREIEKKRRQEMANLYGSLRSVLPLEF--IKGKRSLADHMNEAVNYIKHLQ 97
                 6899*************************65..*********************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 219 aa     Download sequence    
MYAASMDVGM FNNLNTGGQR RKSSLAPTSY GAKNQDKPND DDEKKKMMHR EIEKKRRQEM  60
ANLYGSLRSV LPLEFIKGKR SLADHMNEAV NYIKHLQKRI KIFGVKRDEL KMGSSSNLSA  120
RNLDHGSSGS SSTSTSTLVA VHPCLAGVEI VVSTDGSAEQ FFLLSRMLKI LLGQGLSVIS  180
CATAQVNKRL VYTIQSEVSD PTCIDFSGLQ QTLTEVCYH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G51790.14e-51bHLH family protein