PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP018451.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family NF-YC
Protein Properties Length: 122aa    MW: 13557.7 Da    PI: 6.5147
Description NF-YC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP018451.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YC110.68.8e-35231021997
        NF-YC  19 helPlarikkilka.dedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtdifdflvdivp 97 
                  h+lPlarikki+k   edvkmis eaP++lskacelfi elt rsw+ +++ krrtl+k di++av  tdifdflv  v 
  PCP018451.1  23 HSLPLARIKKIMKNsGEDVKMISGEAPIVLSKACELFIEELTRRSWMTTQQGKRRTLHKEDIESAVIGTDIFDFLVSLVS 102
                  99***********6269**********************************************************98875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 122 aa     Download sequence    
MRQPGRYSRL MMCGGITGRS GPHSLPLARI KKIMKNSGED VKMISGEAPI VLSKACELFI  60
EELTRRSWMT TQQGKRRTLH KEDIESAVIG TDIFDFLVSL VSDSCNSEDI ITPVGIETLD  120
ES
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G54830.34e-34NF-YC family protein