PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP018520.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

ARR-B

Protein Properties

Length: 760aa MW: 85096.4 Da PI: 6.6504

Description

ARR-B family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP018520.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	35.1	2.9e-11	715	743	27	55
G2-like 27 AtPktilelmkvkgLtlehvkSHLQkYRl 55 A Pk+il++m+v+gL ++v SHLQkYRl PCP018520.1 715 AHPKKILQHMSVPGLRKANVSSHLQKYRL 743 78**************************8 PP
2	Response_reg	36.3	2.9e-13	625	710	1	86
EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHH CS Response_reg 1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeeda 86 vl vd + + + ll ++l + gy +v +a+ + +al ++++k+ +l+l+ + +p++d +ell+++r+ + klp++++++ ++e+ + PCP018520.1 625 VLAVDGDSACLTLLSRMLCQLGY-KVLTAKRACDALSIAQKKEdeLHLVLTEVHLPDLDKYELLEKLRAVS-KLPVVIMSDDDDENAM 710 7899*****************.***********888889********************99.******88886543 PP

Sequence ? help Back to Top
Protein Sequence Length: 760 aa Download sequence
MGVGGKFWDL LKPYARNEGF DFLRNKRVAV DLSFWIVQHE AAIKDRARSP HLRLTFFRTI 60 NLFSKFGAFP VFVLDGTPSP LKSQARIARF FRSSGIDSSS LPVAENGVSA ERNSTFTKYI 120 QECVELLELL GMPVLKAKGE AEALCAQLNG DGHVDACITS DSDAFLFGAK CVIKTFRSNS 180 KVGINVSEPF ECYYMSDIEA GLGLKRNHLI ALSLLAGNDH DLNGVQGIGL DTALRFAQTF 240 SEDEILNRLC EIGNGDASLF QGGMKSVDDS VPSLDESPSK TKFSHCSFCG HPGSKRAHFK 300 SSCEFCSNAV GITMSILFFL DRKEKKLKKN ENWRLKVLSK IALEPNFPND EIIEMYLCNN 360 HGCFNENGGP IISWESPKTE MLIEFLTYHQ RWEPSYIRQR MLPMLSTIVL REMAKNPVKK 420 LLYGQYEFNS INRLKIRYGH QYYVVKWKKT APTSCCVSYP IPPEESDIQQ DDVMVVDESL 480 SSLDEPDVPT IDMSGGCCFL LTDENMDLVH AAFPEEVDRF LLEKELKEMK RRKATGGNPE 540 TAGSKGVQLN ITEFFRSAKK QYETEQGEDP TQNTDSQIAE TGKEKRSPSS SNIPKSQLRE 600 AMNDEKAASL ESMKNSTPVL EGVNVLAVDG DSACLTLLSR MLCQLGYKVL TAKRACDALS 660 IAQKKEDELH LVLTEVHLPD LDKYELLEKL RAVSKLPVVI MSDDDDENAM LVLGAHPKKI 720 LQHMSVPGLR KANVSSHLQK YRLSLKREQE EIKRKAPSIG

Sequence ? help Back to Top

Protein Sequence Length: 760 aa Download sequence

MGVGGKFWDL LKPYARNEGF DFLRNKRVAV DLSFWIVQHE AAIKDRARSP HLRLTFFRTI  60
NLFSKFGAFP VFVLDGTPSP LKSQARIARF FRSSGIDSSS LPVAENGVSA ERNSTFTKYI  120
QECVELLELL GMPVLKAKGE AEALCAQLNG DGHVDACITS DSDAFLFGAK CVIKTFRSNS  180
KVGINVSEPF ECYYMSDIEA GLGLKRNHLI ALSLLAGNDH DLNGVQGIGL DTALRFAQTF  240
SEDEILNRLC EIGNGDASLF QGGMKSVDDS VPSLDESPSK TKFSHCSFCG HPGSKRAHFK  300
SSCEFCSNAV GITMSILFFL DRKEKKLKKN ENWRLKVLSK IALEPNFPND EIIEMYLCNN  360
HGCFNENGGP IISWESPKTE MLIEFLTYHQ RWEPSYIRQR MLPMLSTIVL REMAKNPVKK  420
LLYGQYEFNS INRLKIRYGH QYYVVKWKKT APTSCCVSYP IPPEESDIQQ DDVMVVDESL  480
SSLDEPDVPT IDMSGGCCFL LTDENMDLVH AAFPEEVDRF LLEKELKEMK RRKATGGNPE  540
TAGSKGVQLN ITEFFRSAKK QYETEQGEDP TQNTDSQIAE TGKEKRSPSS SNIPKSQLRE  600
AMNDEKAASL ESMKNSTPVL EGVNVLAVDG DSACLTLLSR MLCQLGYKVL TAKRACDALS  660
IAQKKEDELH LVLTEVHLPD LDKYELLEKL RAVSKLPVVI MSDDDDENAM LVLGAHPKKI  720
LQHMSVPGLR KANVSSHLQK YRLSLKREQE EIKRKAPSIG

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	526	532	LKEMKRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G16110.1	1e-16	ARR-B family protein