PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP018574.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family NAC
Protein Properties Length: 248aa    MW: 28237.5 Da    PI: 6.3043
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP018574.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM152.61.8e-4741351128
          NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk....kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevls 94 
                  l pG+rF Pt+eelv++yL++k++gk+ ++ +vi++vdiy+ ePwdLpk     +++++++w+fF++r++++a+g r+nr+t sgyWkatg+   v+s
  PCP018574.1   4 LLPGYRFYPTEEELVSFYLHNKLQGKREDTCRVIPTVDIYSKEPWDLPKssgeLCRGDKEQWFFFTPRQQREAQGGRPNRTTGSGYWKATGSPGYVYS 101
                  579************************9999*****************646654445777************************************** PP

          NAM  95 kkgelvglkktLvfykgrapkgektdWvmheyrl 128
                  ++++++g+kkt+vfykg+ap+g+kt+W m+eyr+
  PCP018574.1 102 SDNKVIGVKKTMVFYKGKAPTGRKTKWKMNEYRA 135
                  ********************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 248 aa     Download sequence    
MEELLPGYRF YPTEEELVSF YLHNKLQGKR EDTCRVIPTV DIYSKEPWDL PKSSGELCRG  60
DKEQWFFFTP RQQREAQGGR PNRTTGSGYW KATGSPGYVY SSDNKVIGVK KTMVFYKGKA  120
PTGRKTKWKM NEYRAIEVDN STTNTPKLGH EFKLCRVYVV SGSSRAFDRR PLDPLGEAQQ  180
KFSDSTGAST SSLKTTMMEK ASASDETYSH SGELGDLPET SAGINSSNWE INEGFEEPLW  240
EWEQLNFL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G22380.12e-94NAC family protein