PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP018665.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family ERF
Protein Properties Length: 248aa    MW: 28070.3 Da    PI: 4.3039
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP018665.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP259.86.5e-19108157355
          AP2   3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                  y+GVr+++ +g+++AeIrd + ng   r++lg+f+tae Aa a+++a+ +++g
  PCP018665.1 108 YRGVRRRP-WGKFAAEIRDSTRNG--VRVWLGTFDTAEAAALAYDQAAFAMRG 157
                  9*******.**********44465..*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 248 aa     Download sequence    
MDSSFFQNPN SEFSFESSSS FNSQEYFHDD HLSWNMFNSN DHHNQSAFPQ LPFNENDSEE  60
MLLYGVLAEA PSGDGNSSGS RVSSTHSKDH EEVNSSSATA DEDQVVAYRG VRRRPWGKFA  120
AEIRDSTRNG VRVWLGTFDT AEAAALAYDQ AAFAMRGSLA VLNFPVDVVH QSLVEMEYDF  180
EEGSSPVLAL KRRHSMKRRS SMNENNKLLY RNQHQKNDEE DDDQLENVVV FEDLGADYLE  240
ELLSISES
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23240.15e-50ERF family protein