PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP018733.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family ERF
Protein Properties Length: 203aa    MW: 22510.2 Da    PI: 5.3938
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP018733.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2612.7e-19555155
          AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkleg 55
                 ++++GVr+++ +g+Wv+eIr+p        +r++lg++ taeeAa+a+++a+  + g
  PCP018733.1  5 KKFRGVRQRH-WGSWVSEIRHP-----LlkRRVWLGTYETAEEAARAYDEAAILMSG 55
                 59*******9.**********8.....334*********************987765 PP
Sequence ? help Back to Top
Protein Sequence    Length: 203 aa     Download sequence    
MVQSKKFRGV RQRHWGSWVS EIRHPLLKRR VWLGTYETAE EAARAYDEAA ILMSGRNAKT  60
NFPVVTNEMA AANDLNNNSG NSNNNSSPSS TTLSAILSAK LRKCCKSPSP SLTCLRLDTE  120
NSLIGVWQKG AGPRSDSNWL MMVELDQKSR LQAPQSEISS STSCALDTEE MAGGQEGGDV  180
DDRMMDEEER VALQMIEELL NRN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G15360.18e-58ERF family protein