PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP018851.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

MYB_related

Protein Properties

Length: 689aa MW: 73538.8 Da PI: 9.5515

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP018851.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	33.3	1.2e-10	213	260	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT.TTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmg.kgRtlkqcksrwqky 47 r++W++ Ed+ l+ av+++G g+W+ I r Rt+ q+ rw + PCP018851.1 213 RKKWSEAEDLELIAAVQKYGEGNWANILRGDFkGDRTPSQLAQRWKNI 260 789**********************9852236*********997 PP

Sequence ? help Back to Top
Protein Sequence Length: 689 aa Download sequence
MVEKTKKPKK GSITEEDTAT LLQRYAPTTV LGLLQEVANS PEGKIDWNRL VAKTSTGISN 60 AREYQMLWRH LAYREALLDK LDNGAQPLDD DSDLEYEVEA HPAVSAEASA EAAACVKFLS 120 EAGLISAVLI SSGLSSDSSH QNGLTVEGLL SMNLPNQSSR SQQNLQPTCS MQGKNITVPV 180 SVLKNSLPVT TTTVETAEGD DALGNGMAPR KRRKKWSEAE DLELIAAVQK YGEGNWANIL 240 RGDFKGDRTP SQLAQRWKNI RKNNVDLNVG GSSSKLSEAQ LAARHSLSIA LNMPNITANT 300 IGTAGTSTHS KLAGTNATSN SLHFTTAEAK LQSQKGLNPV KAEAKPQSQE CLNPAKTYQM 360 GLSGSTTKAP VIAKKTIPKL TDSMVRAAAV AAGARIAFPS DAASLLKAAQ AKNAVHIMPT 420 VGSSTQSVKP GGMSTHSELP PNVHILHSSS VATPLSTPSS TAATPSTTRP RSSKVLPQAS 480 QHTPTKDAML SRQTNGVSCN LDAEQVQDGA VISRDGPNDQ GQKDKRDSPD QKAESKNLST 540 NAEKPVDTLK IESDETDSAV TGVQAEERKS AKDNGLPRSS VNVGASDPSV VDDCENRSAS 600 EKQTDLAIET DGCKGKQVYM KRPVKLACGK IETGTQPPNT MILTQIATMP PGQTLGNVSF 660 RQYNTPMEPI PGVKVFFKKP RRQKQKRKP

Sequence ? help Back to Top

Protein Sequence Length: 689 aa Download sequence

MVEKTKKPKK GSITEEDTAT LLQRYAPTTV LGLLQEVANS PEGKIDWNRL VAKTSTGISN  60
AREYQMLWRH LAYREALLDK LDNGAQPLDD DSDLEYEVEA HPAVSAEASA EAAACVKFLS  120
EAGLISAVLI SSGLSSDSSH QNGLTVEGLL SMNLPNQSSR SQQNLQPTCS MQGKNITVPV  180
SVLKNSLPVT TTTVETAEGD DALGNGMAPR KRRKKWSEAE DLELIAAVQK YGEGNWANIL  240
RGDFKGDRTP SQLAQRWKNI RKNNVDLNVG GSSSKLSEAQ LAARHSLSIA LNMPNITANT  300
IGTAGTSTHS KLAGTNATSN SLHFTTAEAK LQSQKGLNPV KAEAKPQSQE CLNPAKTYQM  360
GLSGSTTKAP VIAKKTIPKL TDSMVRAAAV AAGARIAFPS DAASLLKAAQ AKNAVHIMPT  420
VGSSTQSVKP GGMSTHSELP PNVHILHSSS VATPLSTPSS TAATPSTTRP RSSKVLPQAS  480
QHTPTKDAML SRQTNGVSCN LDAEQVQDGA VISRDGPNDQ GQKDKRDSPD QKAESKNLST  540
NAEKPVDTLK IESDETDSAV TGVQAEERKS AKDNGLPRSS VNVGASDPSV VDDCENRSAS  600
EKQTDLAIET DGCKGKQVYM KRPVKLACGK IETGTQPPNT MILTQIATMP PGQTLGNVSF  660
RQYNTPMEPI PGVKVFFKKP RRQKQKRKP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G09710.1	1e-59	MYB_related family protein