PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP018877.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family ERF
Protein Properties Length: 425aa    MW: 47004.3 Da    PI: 8.6073
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP018877.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP257.24.2e-184089255
          AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                 ++ GVr+++ +gr++AeIrdps+   + r++lg+f+taeeAa a+++ +++++g
  PCP018877.1 40 RFLGVRRRP-WGRYAAEIRDPST---KERHWLGTFDTAEEAALAYDRSARSMRG 89
                 678******.**********965...5*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 425 aa     Download sequence    
MDFFTNSPSK SNSPPSSTKT KRKQQQQQTQ QPQQTQQETR FLGVRRRPWG RYAAEIRDPS  60
TKERHWLGTF DTAEEAALAY DRSARSMRGS KARTNFVYSD MPHGSSVTSI ISPEEDMSAF  120
FTTPLPQTHA QSQTHTQQSF FTHQDPFDAY SFSGSSSAEN ESGSYVPAFG VVADESGSQS  180
QSHTHELPPL PACVSSSTCY GPEGGIMSSD GVGNESGLYE FSDPTTNNGL DSLVGYFKQF  240
WSELGTYYDL LENAFGNRKS TKMAFRAINE LRLMLAPAGG NRAFATSAAP KMKHFAENVR  300
DSEAVQSTMS NIWKFLRKPE NAPVAVLLGF LIVPLTIGTH SALQQLMHAP MVVVNKNKRT  360
MYEVDNPDAA VSSSDKFINK SFLRKVGHIQ EPGRPSMPDS VQHDPFTRPR TAATLKTVGV  420
DPSRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G13910.12e-42ERF family protein