PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP019070.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family NF-YC
Protein Properties Length: 121aa    MW: 13269.4 Da    PI: 7.2943
Description NF-YC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP019070.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YC111.45.1e-35231011996
        NF-YC  19 helPlarikkilka.dedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtdifdflvdiv 96 
                  h+lPlarikki+k   edvkmis eaP+++skace+fi elt rsw+ + e krrt++k d+a+av  tdifdflv  v
  PCP019070.1  23 HSLPLARIKKIMKNsGEDVKMISGEAPIVFSKACEMFIEELTRRSWMTTLEGKRRTVHKDDVASAVVATDIFDFLVSLV 101
                  99***********6269**********************************************************9877 PP
Sequence ? help Back to Top
Protein Sequence    Length: 121 aa     Download sequence    
MRQPGRYSGL TMCGGISGRT GPHSLPLARI KKIMKNSGED VKMISGEAPI VFSKACEMFI  60
EELTRRSWMT TLEGKRRTVH KDDVASAVVA TDIFDFLVSL VSGSCCSEDI TPVEIETLEK  120
S
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G54830.32e-35NF-YC family protein