PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP019190.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family AP2
Protein Properties Length: 121aa    MW: 12970.7 Da    PI: 10.4539
Description AP2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP019190.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2414.9e-1383121144
          AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAak 44 
                  s+y+GV++++++grW+++I+d+      k+++lg f+ta  Aa+
  PCP019190.1  83 SQYRGVTFYRRTGRWESYIWDY-----GKQVYLGGFDTAHAAAR 121
                  78*******************6.....5**********888876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 121 aa     Download sequence    
MSSAKSPLST LSGKLDSPEL ALSLMSSAPP SKLDSPELAL SLMSSAKSPI STPPGKLDSP  60
KLALSPMSST KSPLSTTPRS RSSQYRGVTF YRRTGRWESY IWDYGKQVYL GGFDTAHAAA  120
R
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G39250.14e-20AP2 family protein