PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP019400.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

bHLH

Protein Properties

Length: 350aa MW: 39444.4 Da PI: 4.5318

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP019400.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	12.5	0.00027	221	243	8	30
HHHHHHHHHHHHHHHHHCTSCCC CS HLH 8 rErrRRdriNsafeeLrellPka 30 E +RR ri ++++ L+ellP++ PCP019400.1 221 SEYNRRMRIGERLSALQELLPEP 243 6889******************6 PP

Sequence ? help Back to Top
Protein Sequence Length: 350 aa Download sequence
MPFLRSWLVK IEDPLHRVDM EGQSSLTNPI QMLSLSFCGN AADDVSEALG YDLNQHIMME 60 AGRTADQTDV LSLPWWIQPE KPSHNYVGCP AESSAFVPKS PCEDMWENIP SSVASIHDVG 120 RVSEFQQDGL YSDLGNACGS KSTDFSRDMD SSKMKLLSLH NEELVNTQHQ LPVQYHTSRT 180 DNPNWDSYDS VSQVDPRATI DTPGYLSQPH HSVSKQRTFS SEYNRRMRIG ERLSALQELL 240 PEPAEGRQVC VLDDVIDQIK FLKLQIKVNL SLYTATLQDL SRSRLGGELI AEPIIFHEGY 300 GHYFCHQQML NEPLEEMIGK LLEVDVLAAS ELLEKKGLVL LPMEYSEDSA

Sequence ? help Back to Top

Protein Sequence Length: 350 aa Download sequence

MPFLRSWLVK IEDPLHRVDM EGQSSLTNPI QMLSLSFCGN AADDVSEALG YDLNQHIMME  60
AGRTADQTDV LSLPWWIQPE KPSHNYVGCP AESSAFVPKS PCEDMWENIP SSVASIHDVG  120
RVSEFQQDGL YSDLGNACGS KSTDFSRDMD SSKMKLLSLH NEELVNTQHQ LPVQYHTSRT  180
DNPNWDSYDS VSQVDPRATI DTPGYLSQPH HSVSKQRTFS SEYNRRMRIG ERLSALQELL  240
PEPAEGRQVC VLDDVIDQIK FLKLQIKVNL SLYTATLQDL SRSRLGGELI AEPIIFHEGY  300
GHYFCHQQML NEPLEEMIGK LLEVDVLAAS ELLEKKGLVL LPMEYSEDSA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G24260.1	1e-16	bHLH family protein