PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP019425.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

bHLH

Protein Properties

Length: 477aa MW: 53334.6 Da PI: 6.2393

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP019425.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	38.2	2.5e-12	302	347	4	54
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 +h e+Er+RR+++N++f Lr ++P+ +++Ka+ L Av YI++L PCP019425.1 302 NHVEAERQRREKLNHRFYALRAVVPNV-----SRMDKASLLSDAVSYINEL 347 799*********************6.....4*************998 PP

Sequence ? help Back to Top
Protein Sequence Length: 477 aa Download sequence
MEELIISPSS SSSLVSLPQE NHPSLQQRLQ FILQSQPDWW SYAIFWQTSN DRQVDNGCLF 60 LTWGDGHFQG PKDASPNNHH HNPYGVLSER RKILKGIQSL INDTNNPDNH HQDLILDNMG 120 LNADVTDVEW FYVTSLARSF SVGESISTNV PGKAFSSGSL VWLTGSHELQ FYNCERAKEA 180 QMHGIQTLVC IPTPTGVLEL GSSDLIRENG NLVQQTESLF GADVVWGQPD PXXXXXXXXX 240 DKKEVALDIT AMKKKCGRAC PGLHQLSNLN NINPEHSDSE FPKRTPKKRG RKPGLGRDTP 300 LNHVEAERQR REKLNHRFYA LRAVVPNVSR MDKASLLSDA VSYINELKSK VDELESQVQR 360 ESKKVKVETG DNLDNQSTTT SVEQTRPPNS SASGSTGFEM EVKIVGSDAM IRVQSANVNY 420 PSARLMAALR DLEFEIHHAS LSCMNELMLQ DVVVKVPDNM RSEESIKAAL LKTLDQN

Sequence ? help Back to Top

Protein Sequence Length: 477 aa Download sequence

MEELIISPSS SSSLVSLPQE NHPSLQQRLQ FILQSQPDWW SYAIFWQTSN DRQVDNGCLF  60
LTWGDGHFQG PKDASPNNHH HNPYGVLSER RKILKGIQSL INDTNNPDNH HQDLILDNMG  120
LNADVTDVEW FYVTSLARSF SVGESISTNV PGKAFSSGSL VWLTGSHELQ FYNCERAKEA  180
QMHGIQTLVC IPTPTGVLEL GSSDLIRENG NLVQQTESLF GADVVWGQPD PXXXXXXXXX  240
DKKEVALDIT AMKKKCGRAC PGLHQLSNLN NINPEHSDSE FPKRTPKKRG RKPGLGRDTP  300
LNHVEAERQR REKLNHRFYA LRAVVPNVSR MDKASLLSDA VSYINELKSK VDELESQVQR  360
ESKKVKVETG DNLDNQSTTT SVEQTRPPNS SASGSTGFEM EVKIVGSDAM IRVQSANVNY  420
PSARLMAALR DLEFEIHHAS LSCMNELMLQ DVVVKVPDNM RSEESIKAAL LKTLDQN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G00870.1	2e-78	bHLH family protein