PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP019426.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

bHLH

Protein Properties

Length: 496aa MW: 55822.8 Da PI: 6.2042

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP019426.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	37.3	4.8e-12	322	366	5	54
HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 h e+Er+RR+++N++f Lr ++P+ +++Ka+ L Av YI +L PCP019426.1 322 HVEAERQRREKLNHRFCALRAVVPNV-----SRMDKASLLSDAVSYIIEL 366 899********************6.....4*************887 PP

Sequence ? help Back to Top
Protein Sequence Length: 496 aa Download sequence
MEELIISPSS SSSLVSLPQE NHPSLQQRLQ FVLQSQPDWW SYAIFWQASN DHQLYNGRLF 60 LTWGDGHFQG PKDTSSNNHH HNPYEVLSER RKILKGIQSL INDTNNPDNH YQDMILHNMG 120 LNANTTNIEG FFVRSFARSF SVGESISTNV PGKAFSSGSL VWLTGSHELQ SYVCERAKEA 180 QMHGIQTLVC IPTPTGVLEL GSSDLIRENW NLVQQTKSLF WSDLVSDQQE PGTRSPINLI 240 NRNFSFADVD IIAGVQEEEN KKEVPLDITA MKKKCGRACP GPIPFSNLNN LNPEPSDSEF 300 PKRTPKKRGR KPGLGRDTTL DHVEAERQRR EKLNHRFCAL RAVVPNVSRM DKASLLSDAV 360 SYIIELKSKV DEMESQVQRE SKKVKAETVD NLDNQSTTTS VDQTRPPNSS ASESTGLEVE 420 VKIVCSDAMI RVRSENVNYP SARLMVALRD LDFEMCHASL SCMNELMLQD VVVKVPDNMR 480 SEESIKAALL RILDQN

Sequence ? help Back to Top

Protein Sequence Length: 496 aa Download sequence

MEELIISPSS SSSLVSLPQE NHPSLQQRLQ FVLQSQPDWW SYAIFWQASN DHQLYNGRLF  60
LTWGDGHFQG PKDTSSNNHH HNPYEVLSER RKILKGIQSL INDTNNPDNH YQDMILHNMG  120
LNANTTNIEG FFVRSFARSF SVGESISTNV PGKAFSSGSL VWLTGSHELQ SYVCERAKEA  180
QMHGIQTLVC IPTPTGVLEL GSSDLIRENW NLVQQTKSLF WSDLVSDQQE PGTRSPINLI  240
NRNFSFADVD IIAGVQEEEN KKEVPLDITA MKKKCGRACP GPIPFSNLNN LNPEPSDSEF  300
PKRTPKKRGR KPGLGRDTTL DHVEAERQRR EKLNHRFCAL RAVVPNVSRM DKASLLSDAV  360
SYIIELKSKV DEMESQVQRE SKKVKAETVD NLDNQSTTTS VDQTRPPNSS ASESTGLEVE  420
VKIVCSDAMI RVRSENVNYP SARLMVALRD LDFEMCHASL SCMNELMLQD VVVKVPDNMR  480
SEESIKAALL RILDQN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G32640.1	1e-44	bHLH family protein