PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP019478.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family C2H2
Protein Properties Length: 197aa    MW: 22198.4 Da    PI: 6.4173
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP019478.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H214.88.2e-053355123
                 EEETTTTEEESSHHHHHHHHHHT CS
      zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                 y+C+ C++ Fs+   L  H++ H
  PCP019478.1 33 YECNFCKRGFSNAQALGGHMNIH 55
                 99*******************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 197 aa     Download sequence    
MESNQANQEN SDQVMTSDDQ QQEGASKQAA KSYECNFCKR GFSNAQALGG HMNIHRKDKA  60
KLKQVSSSNT VETEHQQQQK LLDIPKMPSS YSPILPTINS LQHDKPIGHD IDRSTTRAPW  120
PWFLYEESDT TIQQLPLFSQ TPSHNKHHQN PGIPQVHGDQ SEKSLQLSGS ELDLELRLGP  180
EPQNSSSSTE NTTRKFF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G53820.11e-17C2H2 family protein