PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP019560.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

NAC

Protein Properties

Length: 455aa MW: 52475.8 Da PI: 5.081

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP019560.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	74.1	3.3e-23	157	294	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykv.ePwdLpk.........kvka..eekewyfFskrdkkyatgkrknra..tksgyWk 84 +p+G+rF P+d+el+ +yL++k++g++ + +++++d++ + eP+d+ + + + ++k++y F++ + k+++g+r r+ t+ g+Wk PCP019560.1 157 VPVGYRFMPRDDELLLDYLRPKLDGQDYPK-GIVHDCDLHGLeEPSDIWRrlsrashegH--EctDDKDIYVFTTLNLKAPNGSRFCRTvgTTGGTWK 251 599**********************999.89***9978643566555442..14377799**************645779 PP NAM 85 atgkdkevlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128 k+++++ ++++g +k +++ ++ + +++ +W+mhe++l PCP019560.1 252 GEDAGKKIYASgIKHAIGFRKRFTYRNKGS--PQNDHWIMHEFHL 294 *****9855677*****95444..459*******8 PP

Sequence ? help Back to Top
Protein Sequence Length: 455 aa Download sequence
MQEKNIVLCI LRRKDDISKK RKLEEQDNYE ENAANHFQPQ ALNAINVGDY NNATIYMEQI 60 AFDHSQPLAL SATTTGDYSN DPRYPEENVA NHFQPQEFDA ATTGDYSDPH WYIEQNAADH 120 FEPHDEAHNA TNEDLTTALR RMEEILMSVI MAGYYQVPVG YRFMPRDDEL LLDYLRPKLD 180 GQDYPKGIVH DCDLHGLEEP SDIWRRLSRA SHEGHECTDD KDIYVFTTLN LKAPNGSRFC 240 RTVGTTGGTW KGEDAGKKIY ASGIKHAIGF RKRFTYRNKG SPQNDHWIMH EFHLDPSLLR 300 NKHHQEKNIV LCILRRKDDI SKKRKLEERD NYEENAANHF QPQALNAINV GDYNNAPIYM 360 EQIAFDHSQP LALTATTIGD YSNDPRYPEE NVANHFQPQE FDATTTGDYS NTHWYTEQNA 420 ADHFEPHDQA CNATNEDLTT ALRRMEEILM SGFRG

Sequence ? help Back to Top

Protein Sequence Length: 455 aa Download sequence

MQEKNIVLCI LRRKDDISKK RKLEEQDNYE ENAANHFQPQ ALNAINVGDY NNATIYMEQI  60
AFDHSQPLAL SATTTGDYSN DPRYPEENVA NHFQPQEFDA ATTGDYSDPH WYIEQNAADH  120
FEPHDEAHNA TNEDLTTALR RMEEILMSVI MAGYYQVPVG YRFMPRDDEL LLDYLRPKLD  180
GQDYPKGIVH DCDLHGLEEP SDIWRRLSRA SHEGHECTDD KDIYVFTTLN LKAPNGSRFC  240
RTVGTTGGTW KGEDAGKKIY ASGIKHAIGF RKRFTYRNKG SPQNDHWIMH EFHLDPSLLR  300
NKHHQEKNIV LCILRRKDDI SKKRKLEERD NYEENAANHF QPQALNAINV GDYNNAPIYM  360
EQIAFDHSQP LALTATTIGD YSNDPRYPEE NVANHFQPQE FDATTTGDYS NTHWYTEQNA  420
ADHFEPHDQA CNATNEDLTT ALRRMEEILM SGFRG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G62700.1	2e-19	NAC family protein