PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP019593.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

MYB

Protein Properties

Length: 261aa MW: 29958.4 Da PI: 8.9863

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP019593.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	48.8	1.6e-15	23	69	2	48
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 + W +eEd++l ++v+ +G g+W+ ++++ g++R +k+c++rw +yl PCP019593.1 23 NLWKPEEDLILRQYVETHGEGNWANVSKRSGLKRGGKSCRLRWKNYL 69 56***************************99**********97 PP
2	Myb_DNA-binding	52.3	1.4e-16	75	120	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg +++eE++l+++ +k+lG++ W++Ia +++ gRt++++k++w+++l PCP019593.1 75 RGDMSQEEQDLIIRMHKLLGNR-WSLIAGRLP-GRTDNEVKNYWNTHL 120 7899****************.*****.**********996 PP

Sequence ? help Back to Top
Protein Sequence Length: 261 aa Download sequence
MEMTGNKRSS SVVKAGNAQP KKNLWKPEED LILRQYVETH GEGNWANVSK RSGLKRGGKS 60 CRLRWKNYLR PNIKRGDMSQ EEQDLIIRMH KLLGNRWSLI AGRLPGRTDN EVKNYWNTHL 120 NKNISCCPAA GSKRKSTTIT DYSNDGINIT KKKNKIGTGK TSSTATTTTD DPMITSSTDR 180 IPKDTSSDHQ HQHHKEPNIE SMFTSTSTEE SWFYDDMDIE SPRELQYYQY YLPSFSSNFN 240 AAFAFDEEPF IGYMDSFLLF D

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G52600.1	4e-65	MYB family protein