PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP019604.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family MYB_related
Protein Properties Length: 304aa    MW: 33365.3 Da    PI: 10.5016
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP019604.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding36.11.5e-11555146
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT.....TTS-HHHHHHHHHH CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmg.....kgRtlkqcksrwqk 46
                     +++WT eE+e l+ +v ++G g W+tI            R+  ++k++w++
      PCP019604.1  5 KQKWTSEEEEALKAGVLKHGAGKWRTILTDPEfntilHLRSNVDLKDKWRN 55
                     79***********************************88**********99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 304 aa     Download sequence    
MGAPKQKWTS EEEEALKAGV LKHGAGKWRT ILTDPEFNTI LHLRSNVDLK DKWRNINVTA  60
IWGSRQKAKL ALKRNLPTPK HENNNNPLAV STVIQSHKEV VDAKPLAISG GKSQTTESKD  120
SKHPISRLDH LILEAITNLK EPGGSDRAAI VMYIEEQYWA PPNLKKLLSS KLKHMTTNRK  180
LVKVKHRYRI PATSEKRRSS SALLPNGKQK DSSRTDKSDV NILTKSQVDA DLTKMRSMTA  240
QEAAAAAAQA VAEAEAAIAA AEEAAREAEV AEAEAEAAQV FAKAAMKALK CRKLGKVLLS  300
NFTS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G49950.11e-74MYB_related family protein