PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP019688.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family B3
Protein Properties Length: 248aa    MW: 27626.2 Da    PI: 10.0478
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP019688.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B352.11.2e-161198197
                 EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE CS
           B3  1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvf 97
                 ffk l     ++ + +++p +f + + +++++ k+ ++e+ +  sWev +  r + g+ ++++GW+eFvk+++Lk+g+f+vF++ gr+ f  +v v+
  PCP019688.1 11 FFKPL--IPGFEYA-ISIPASFSQ-N-LNERNAKKAVIESCQ-GSWEVGV-ARTGEGTLYFEGGWEEFVKDHNLKVGEFLVFRHLGRMVF--HVNVY 98
                 55666..4456665.99*****84.4.445566677777755.59*****.35555559***************************9999..66664 PP
2B336.67.9e-121352191087
                  HHHTT-EE--HHH.HTT---..--SEEEEEETTS.-EEEEEE...EEETTE..EEE-.......TTHHHHHHHHT--TT-EEEEEE-SS CS
           B3  10 vlksgrlvlpkkfaeehggkkeesktltledesg.rsWevkl.iyrkksgr..yvlt.......kGWkeFvkangLkegDfvvFkldgr 87 
                    +++ +++p  f+++hg+  ++  +++l+ +    +W v+l ++++++++  +  +       +GW +F ++ngLk gD + F l++ 
  PCP019688.1 135 LPSKCYVTIPSGFVKAHGLGDRK--KMILKVPFVrGKWPVELgTWQGGKRGaaI--SlrtairtRGWYKFYEDNGLKIGDCCKFVLKEV 219
                  3456999**********888555..677777544379*****556555555563..33355666********************98754 PP
Sequence ? help Back to Top
Protein Sequence    Length: 248 aa     Download sequence    
MAGSPPFPRR FFKPLIPGFE YAISIPASFS QNLNERNAKK AVIESCQGSW EVGVARTGEG  60
TLYFEGGWEE FVKDHNLKVG EFLVFRHLGR MVFHVNVYEP LGCEKVFPPP PPPAAAPSTS  120
SPLFFLKSIS ETHSLPSKCY VTIPSGFVKA HGLGDRKKMI LKVPFVRGKW PVELGTWQGG  180
KRGAAISLRT AIRTRGWYKF YEDNGLKIGD CCKFVLKEVP DSKSKPVIME VDIKRMVLGS  240
SKAVVNFE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G31690.12e-24B3 family protein