PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP019715.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family ERF
Protein Properties Length: 228aa    MW: 24427.1 Da    PI: 4.5695
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP019715.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP249.88.7e-1662111155
          AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                  + y+G+r ++ +g+Wv+eIr+p++   ++r++lg++  +e+Aa+a++ a+ +l+g
  PCP019715.1  62 PVYRGIR-CR-SGKWVSEIREPRK---TTRIWLGTYPKPEMAAAAYDVAAIALKG 111
                  68****9.55.6*********843...5***********************9988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 228 aa     Download sequence    
MADPYSNVPK TPIEQPTTTS NPNPFIQIPP TLPNPPTSTL PDDSSSSSSP RGSTLGSSRR  60
HPVYRGIRCR SGKWVSEIRE PRKTTRIWLG TYPKPEMAAA AYDVAAIALK GPDTPLNFPN  120
SILTYPIPAS SAASDIRSAA ARAAQSRADM LAPQERESGG RSEPSGVDNE GGGGGVVSQQ  180
QEEYMDEEEL LNMPNLLVDM AEGMLVSPPR ISSDNSPGNS DGENLWSY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52020.11e-40ERF family protein