PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP019717.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family ERF
Protein Properties Length: 221aa    MW: 24057.9 Da    PI: 4.8578
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP019717.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP258.51.7e-1858108155
          AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                  + ++GVr++  +g+Wv+e+r+p   +k++r++lg+f tae+Aa+a++ a+ +l+g
  PCP019717.1  58 PVFRGVRRRN-SGKWVCEVREP---NKKTRIWLGTFPTAEMAARAHDVAAIALRG 108
                  579****888.8******9998...347*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 221 aa     Download sequence    
MDGCSNYYVD PPGESSSASE TSSARPMFMT LSDEELLLAS TCPKKRAGRK KFRETRHPVF  60
RGVRRRNSGK WVCEVREPNK KTRIWLGTFP TAEMAARAHD VAAIALRGRS ACLNFADSAR  120
RLPVPASSNA KDIQTAATEA AEAFRPTQES DEVCGASVAA PTESTSASEQ QQVFYIDEEA  180
VFGMPGLLAD MAEGMLLPPP HYSADDDVDI CADVALWSFS D
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G25470.15e-75ERF family protein