PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP019808.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family LBD
Protein Properties Length: 111aa    MW: 12420.8 Da    PI: 4.6319
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP019808.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF26028.54.4e-0914358100
       DUF260  58 msslvyeAearardPvyGavgvilklqqqleqlkaelallkee 100
                  ms+++ eA+ ra+dPv G+++v+++  + +++++ael++++ +
  PCP019808.1   1 MSTIFVEADHRAKDPVGGCHAVVRSPLWSINRHQAELDSVRYQ 43 
                  799**********************************998866 PP
Sequence ? help Back to Top
Protein Sequence    Length: 111 aa     Download sequence    
MSTIFVEADH RAKDPVGGCH AVVRSPLWSI NRHQAELDSV RYQLELLLSG GNVMAIAQTL  60
EDFKDNVGTW NVYDHMQFHQ VQKNCSQEQE EQGNIGGGVA PQPQEEQANV F