PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP020006.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family bHLH
Protein Properties Length: 308aa    MW: 35008.6 Da    PI: 4.8199
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP020006.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH26.51.2e-08184225854
                  HHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
          HLH   8 rErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                  + r RR+ri ++ +eL +l+P a     +K++ ae+L+ A +Y+k L
  PCP020006.1 184 AARERRRRITDKTQELGRLIPGA-----TKMNTAEMLQAAYKYVKFL 225
                  6699******************9.....9****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 308 aa     Download sequence    
MAMSTATFCP TDDWGSVQLL NPPEMNMLSF PSQQELQATS SGIFGLQDYY YSLANINPDD  60
TCIDPLFQPY ESSENFFHPD FCSPTDNINL ASLSPEICPT LDEYDYSYQA YPKRQKLFHD  120
QQVQYYNSNF PIATPNYFNA YHRFLQPEIL VPTPEIQIQN PPAAAKLNNK AVSGTGTVSP  180
QSIAARERRR RITDKTQELG RLIPGATKMN TAEMLQAAYK YVKFLRAQVS VLKLMTDSPI  240
QQERKEEGLH INQERLQVVA SPIVQEKLYS VEKCLVLKEF VEVLAKDDDI QSKPLLKDKF  300
AELLQTNG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G30670.14e-24bHLH family protein