PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP020042.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family ERF
Protein Properties Length: 327aa    MW: 36818.4 Da    PI: 6.1882
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP020042.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP263.25.6e-20186237256
          AP2   2 gykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkklege 56 
                  +y+GVr+++ +g+++AeIrdp   + +  r++lg+f ta eAaka+++a+ kl+g+
  PCP020042.1 186 HYRGVRQRP-WGKYAAEIRDP---NrRGSRVWLGTFETAIEAAKAYDRAAFKLRGA 237
                  8********.**********9...4334**************************95 PP
Sequence ? help Back to Top
Protein Sequence    Length: 327 aa     Download sequence    
MALDQVSALE LIKHHLLGES FATELSDFAS SFPQNQWSPE INSDLSRSQS DSFCSKSSST  60
FESSIEISDY LDSTDIFDFN SADFFDFEPK PQVIDLTTPK STSLSSQSSF EFDSKPQVSD  120
DFFEFEQKPQ IPNQTALKPA NPTRKPALTI SLPNKTEWIQ FASSDQAAAK PAAVQKVRSN  180
EEKKKHYRGV RQRPWGKYAA EIRDPNRRGS RVWLGTFETA IEAAKAYDRA AFKLRGAKAI  240
LNFPLEAGKA EPVVSVERKR RRVEQREEAK EVVVVKKEKL TETPLTPSSW MSFWESEKED  300
VKGVFSIPPL SPLSPHPAMG YPQVMVV
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1258262RKRRR
2259263KRRRV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G47230.13e-47ERF family protein