PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP020043.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family ERF
Protein Properties Length: 285aa    MW: 30804.6 Da    PI: 9.4912
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP020043.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP262.11.2e-19151201255
          AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                  +y+GVr+++ +g+++AeIrdp +ng  +r++lg+f tae+Aa a+++a+ +++g
  PCP020043.1 151 HYRGVRQRP-WGKFAAEIRDPAKNG--ARVWLGTFETAEDAALAYDRAAYRMRG 201
                  8********.***********9987..*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 285 aa     Download sequence    
MYGQSGTDSD YALLDSIRRH LLGETDFRIG NPMTNSGSGP LFSRSSSFSS LYPCLTQNWG  60
DLPLKEDDSE DMVLYGVLRD AVSVGWVPSG SADTLPYDFS VKSEPEVLPP VNKVQEKKAA  120
PVQPVRPVQP VRPVQQSAQA VPAVVPAKGK HYRGVRQRPW GKFAAEIRDP AKNGARVWLG  180
TFETAEDAAL AYDRAAYRMR GSRALLNFPL RINSGEPDPV RLTSKRSSPE PSSSSSESGS  240
PKRRKKANGS TPAQAGLEMG AGIGQQQVEV QVAVSVTHGE QLLVS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G17500.16e-61ERF family protein