PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP020091.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family ERF
Protein Properties Length: 273aa    MW: 29634 Da    PI: 6.1487
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP020091.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2643.2e-20118168155
          AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                  ++++GVr+++ +grW+AeIrdp+    r kr++lg+f+taeeAa  +++a+  l+g
  PCP020091.1 118 KKFRGVRRRP-WGRWAAEIRDPT----RrKRIWLGTFDTAEEAATVYDRAAILLKG 168
                  59********.**********84....34**********************98876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 273 aa     Download sequence    
MTTFQPISSV HSTVKFSEHI TTVTKPMIQE PDNPTRIPPK LVRIILTDAD ATDSSSDDEG  60
RSVRRVKRHV RQISLEHSSP SSSSPSSSSS VSSGQSKRAR KDSRPGSKSP ETAADLLKKF  120
RGVRRRPWGR WAAEIRDPTR RKRIWLGTFD TAEEAATVYD RAAILLKGPD AVTNFSNAVI  180
KQETVVGDLT VPAAEQGCGC VTPSSSGALS SPTSVLGYGE TPFDGLSYGY ADASEFDFGL  240
PLSLPDIMLS SNSFARDEFG EFDIDDFLAD VVC
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1124143RRRPWGRWAAEIRDPTRRKR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G27950.14e-31ERF family protein