PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP020270.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

bHLH

Protein Properties

Length: 550aa MW: 60131.7 Da PI: 9.0623

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP020270.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	12.3	0.00032	266	283	2	19
HHHHHHHHHHHHHHHHHH CS HLH 2 rrahnerErrRRdriNsa 19 r +h++ E+rRR++iN++ PCP020270.1 266 RSKHSATEQRRRSKINDR 283 889*************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 550 aa Download sequence
MELPQPRPFG TEGRKSTHDF LSLYSHSAAQ QDPRSPAQGG YLETHDFLQP LERMGKPCTA 60 KEETSAEIST TEKPPSHAAA QPTTSVEHIL PGGIGTYSIS HISYFNQRVP KPEGSPVFTV 120 AQASSSERNV DENSNCSSYA GSGFTLWEES AKNKGKTGKE NVVGERPAGT VRGQWTSSER 180 PAQSSSNNHR GCFSSQSSGQ KNMSFREMMK SAAKGSTQED ELDDQEEFVL KKETSTTTTN 240 ATTPYKGDLR VKADVKSSDQ KANTPRSKHS ATEQRRRSKI NDRQVVEYIQ FLQERVNKYE 300 GSYQGWNPDP AKLMPWRNNH KLRESYCDQS RGINGGSAPA LAFAATFDEK PTSVSPAIPG 360 SFAQNPVESD TSTETTFKAV DHHPGITSKP MPFPLSMQPN FFTPVRTSGA AAAVPQIPPR 420 LPSDAENTSR HQPVLCQTIS RTTDGAATRE KLKEQELTIE GGRINISSAY SQGLLNTLTQ 480 ALQSSGVDLS LASISVQIEL GKRANRRSPI PKSAIKENEI PISTLGKKHS VIASSEESER 540 AQKKLKTCRN

Sequence ? help Back to Top

Protein Sequence Length: 550 aa Download sequence

MELPQPRPFG TEGRKSTHDF LSLYSHSAAQ QDPRSPAQGG YLETHDFLQP LERMGKPCTA  60
KEETSAEIST TEKPPSHAAA QPTTSVEHIL PGGIGTYSIS HISYFNQRVP KPEGSPVFTV  120
AQASSSERNV DENSNCSSYA GSGFTLWEES AKNKGKTGKE NVVGERPAGT VRGQWTSSER  180
PAQSSSNNHR GCFSSQSSGQ KNMSFREMMK SAAKGSTQED ELDDQEEFVL KKETSTTTTN  240
ATTPYKGDLR VKADVKSSDQ KANTPRSKHS ATEQRRRSKI NDRQVVEYIQ FLQERVNKYE  300
GSYQGWNPDP AKLMPWRNNH KLRESYCDQS RGINGGSAPA LAFAATFDEK PTSVSPAIPG  360
SFAQNPVESD TSTETTFKAV DHHPGITSKP MPFPLSMQPN FFTPVRTSGA AAAVPQIPPR  420
LPSDAENTSR HQPVLCQTIS RTTDGAATRE KLKEQELTIE GGRINISSAY SQGLLNTLTQ  480
ALQSSGVDLS LASISVQIEL GKRANRRSPI PKSAIKENEI PISTLGKKHS VIASSEESER  540
AQKKLKTCRN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G08130.2	1e-112	bHLH family protein