PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP020322.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family MYB
Protein Properties Length: 289aa    MW: 32752.1 Da    PI: 4.8969
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP020322.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding53.84.6e-173582148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     +g+WT+eEd +l ++v+ +G g+W++ a + g++Rt+k+c++rw++yl
      PCP020322.1 35 KGPWTAEEDSILNNYVNIHGEGHWNSLACHAGLKRTGKSCRLRWLNYL 82
                     79********************************************97 PP
2Myb_DNA-binding47.73.6e-1588131146
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                      rg+ T +E++++++++ ++G++ W++Ia++++ gRt++++k++w++
      PCP020322.1  88 RGNITLQEQLIILQLHSRWGNR-WSKIAEYLP-GRTDNEIKNYWRT 131
                      7899******************.*********.***********96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 289 aa     Download sequence    
MDINNVHDQM RSAGYGSLAA AATHDQPIEG LDLRKGPWTA EEDSILNNYV NIHGEGHWNS  60
LACHAGLKRT GKSCRLRWLN YLRPNVQRGN ITLQEQLIIL QLHSRWGNRW SKIAEYLPGR  120
TDNEIKNYWR TRVQKQAKQL KCDVNSKQFQ DAMRYIWIPR LIERIGSLPE AVPDQPSTCI  180
TTTSESECQY LVDPNFVPET SGSTSSDSYD QVQVCSIPTD PTSSGDEFMT YPCSGQYGSE  240
NGSGYSKNGN SDIHGFEQSN YWSTGGDTSV ENLWTEENIW FLQQQLSDD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G47190.15e-77MYB family protein