PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP020334.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

MYB_related

Protein Properties

Length: 742aa MW: 82431.4 Da PI: 4.8147

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP020334.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	22.9	2e-07	585	627	3	46
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rW++++ el+++a++q G++ ++ I + Rt+ q+k+++ k PCP020334.1 585 RWSKQDTELFYEAIQQCGSD-FTMIQELYFPSRTRHQVKLKFKK 627 9*****************.*98766********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 742 aa Download sequence
MVSIRKYEVV FGLAAKRGEP AEMYQFIDKA SAIIEMSDWD DVFLAPAGVP ARAGGRFRPK 60 AKPRPSRVAS TAAAPALPIV ITEIPVTLST TVSDSVPSVD VGDSKLTDQV GSIEPSENNE 120 IPLSDGKKDI GRCESTADVA GSDGKALGEN ADIFSGLECL DDSISQTTRG TAEIAVNKSG 180 DKADTEAETC SDYCTTQDPM SCREVSVSNK QGEMQLESEV DGAFSDFEVL DVGSDVAISS 240 ERHAGKHQPK LKVKKGKENM HIPSSEVEPN MGSQAAHLVH FETGDMNESS LPAFPTRHVI 300 DHPSPRLDDS STLNPTSDSQ VNTENLAETN HSDGAILGDA VHSEDVGGTT EKVGRKSRNR 360 NTSTTSDLPQ KRKSSATEKA EGETSSRQLR KRVPHKQVDE LADEASDDSF TAEPSSDSKI 420 NEDEDNIDEY REHKTSQRKR APKKSKKPVS EKEPVRRHKK TKEASDQSTK DAPKKFSHST 480 RRNRRQVDKS LLEIPEEEFD PCKFPLKDLI RLAEHKELLK IKEARKLTTR QPNESTNSDS 540 HKEGSHNEEE FYPSEHGTDE NQATYHVNSS LLNYQTYMDK APTARWSKQD TELFYEAIQQ 600 CGSDFTMIQE LYFPSRTRHQ VKLKFKKEER QHPLRISEAV LSRLTHSTDH SQFTSYIEKL 660 QQAARANKES NADESVDMTG KEEGLREQTR DTDEGMEKPK SEEVQDQEAD VAEVQDQEAV 720 AAEVSNPLKS DEIDDDDFTW SD

Sequence ? help Back to Top

Protein Sequence Length: 742 aa Download sequence

MVSIRKYEVV FGLAAKRGEP AEMYQFIDKA SAIIEMSDWD DVFLAPAGVP ARAGGRFRPK  60
AKPRPSRVAS TAAAPALPIV ITEIPVTLST TVSDSVPSVD VGDSKLTDQV GSIEPSENNE  120
IPLSDGKKDI GRCESTADVA GSDGKALGEN ADIFSGLECL DDSISQTTRG TAEIAVNKSG  180
DKADTEAETC SDYCTTQDPM SCREVSVSNK QGEMQLESEV DGAFSDFEVL DVGSDVAISS  240
ERHAGKHQPK LKVKKGKENM HIPSSEVEPN MGSQAAHLVH FETGDMNESS LPAFPTRHVI  300
DHPSPRLDDS STLNPTSDSQ VNTENLAETN HSDGAILGDA VHSEDVGGTT EKVGRKSRNR  360
NTSTTSDLPQ KRKSSATEKA EGETSSRQLR KRVPHKQVDE LADEASDDSF TAEPSSDSKI  420
NEDEDNIDEY REHKTSQRKR APKKSKKPVS EKEPVRRHKK TKEASDQSTK DAPKKFSHST  480
RRNRRQVDKS LLEIPEEEFD PCKFPLKDLI RLAEHKELLK IKEARKLTTR QPNESTNSDS  540
HKEGSHNEEE FYPSEHGTDE NQATYHVNSS LLNYQTYMDK APTARWSKQD TELFYEAIQQ  600
CGSDFTMIQE LYFPSRTRHQ VKLKFKKEER QHPLRISEAV LSRLTHSTDH SQFTSYIEKL  660
QQAARANKES NADESVDMTG KEEGLREQTR DTDEGMEKPK SEEVQDQEAD VAEVQDQEAV  720
AAEVSNPLKS DEIDDDDFTW SD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G39160.1	3e-45	MYB_related family protein