PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP020369.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family NF-YB
Protein Properties Length: 166aa    MW: 18218.5 Da    PI: 9.4575
Description NF-YB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP020369.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YB37.74.8e-12893584
        NF-YB  5 drflPianvsrimkkvlPanak......iskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplk 84
                  ++lP a v r++k  l +  k      + k+a     e    fi ++++ a+d c+++kr+ti+gdd+l al ++ f ++++pl+
  PCP020369.1  8 AEELPKAIVRRVVKDKLSQCHKgdgdliVHKEAILAFSESSRIFIHYLSATANDICREKKRQTISGDDVLKALEEIEFPEFIKPLE 93
                 5789**********9998876644445467788888899999******************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 166 aa     Download sequence    
MEKVVAEAEE LPKAIVRRVV KDKLSQCHKG DGDLIVHKEA ILAFSESSRI FIHYLSATAN  60
DICREKKRQT ISGDDVLKAL EEIEFPEFIK PLEDLRPKNP GKGAGKNEGK NATKNAGRSG  120
GKKAGKNAGT SKTKEVKKKR KLEESSSRKQ GGKDEDNQDE DGSGDE
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1137142KKKRKL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G27470.19e-37NF-YB family protein