PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP020498.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

WRKY

Protein Properties

Length: 221aa MW: 24892.4 Da PI: 9.5608

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP020498.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	103.3	1.3e-32	142	200	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK vk+s +prsYYrCt+++C+vkk+v+r ++d+++v++tYeg Hnh+ PCP020498.1 142 LDDGYRWRKYGQKAVKNSSYPRSYYRCTHHTCNVKKQVQRLSKDTSIVVTTYEGIHNHP 200 59********************************************************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 221 aa Download sequence
MEDHHQQHNP PPLTSQLPPL SLPFLLPPPP QNPPLPPPYL FTPSSSSSLM TNPPDLLDID 60 WVSLLSGGTQ AAGWLSHDQI NSFKPMAMVD KNISGSDGTI ISEAADQEEK VGIKRKAGGR 120 MRKAAASRPR FAFHTRSTDD ILDDGYRWRK YGQKAVKNSS YPRSYYRCTH HTCNVKKQVQ 180 RLSKDTSIVV TTYEGIHNHP CEKLMETLTP LLKQMQFLSR F

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G64000.1	5e-57	WRKY family protein