PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP020582.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

bHLH

Protein Properties

Length: 278aa MW: 30918.7 Da PI: 5.9806

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP020582.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	12.9	0.0002	228	264	13	54
HHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 13 RdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 R+++++ Lr ++P k ++ +++L +Av+Y+ksL PCP020582.1 228 RQKMKKMVRALRGIVPGG-----KEMNTVAVLDEAVQYLKSL 264 789999999999999986.....67***************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 278 aa Download sequence
MNIGVNVKKY RAIKEVGKIL MSVGVIAYFH QMQVCQSDQQ FDPNKAAPPF ANQVGNNYMH 60 IPVASAYGAV LPNEANRFKP FHGVEFQTSS ICPKNFIIFD QTDHRSQIMF NPEIAHKITG 120 PAFNLCAAYI QDNLGLNERN NDNREASSTL KEDSDDIDAL LSLDEEELED YDEEEVSTAR 180 THGNYGSSFS DSCSSYGLKT KKEGLRSSLE KSSGIGSSSS SYNSERKRQK MKKMVRALRG 240 IVPGGKEMNT VAVLDEAVQY LKSLKVELQK IGVENLND

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G29950.1	6e-33	bHLH family protein