PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP020586.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family NAC
Protein Properties Length: 131aa    MW: 15352.8 Da    PI: 10.483
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP020586.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM95.77.3e-303510754128
          NAM  54 eekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
                  +ekewyfFs rd+ky++g+r+nra  sgyWkatg dk++ +   +  g+kk Lvfy g+ap+g+kt+W+mheyrl
  PCP020586.1  35 GEKEWYFFSLRDRKYPNGSRPNRAGGSGYWKATGVDKPIGH--PKSLGIKKALVFYVGKAPRGKKTNWIMHEYRL 107
                  579************************************99..6789**************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 131 aa     Download sequence    
MSSVDFQLPS RFRFHSTDEE LVKHYLYRKC LALYGEKEWY FFSLRDRKYP NGSRPNRAGG  60
SGYWKATGVD KPIGHPKSLG IKKALVFYVG KAPRGKKTNW IMHEYRLADV DQSPRKKNSL  120
RVYMLLSFLL D
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G77450.13e-63NAC family protein