PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP020622.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family bHLH
Protein Properties Length: 319aa    MW: 35292.7 Da    PI: 4.8805
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP020622.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH34.34.3e-11137179855
                  HHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
          HLH   8 rErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                   Er+RR r+++++ eLr+l+P+      +K++Ka+i+  Av Y+++Lq
  PCP020622.1 137 SERKRRGRMKERLYELRSLVPNI-----TKMDKASIVGDAVLYVQDLQ 179
                  6*********************7.....7******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 319 aa     Download sequence    
MDALGNHLAC HNINNSELLD FIDDANFDQF VDLIRGGEGE HPIANFDCEL MVNGCLDDYN  60
MFGPASPTPP GPMFGFNDAF LPDPSTFVLT TLPNFDEEMK GEEDYNDGED SSGTTNTNTT  120
TTTTKRQKVD RSRTLVSERK RRGRMKERLY ELRSLVPNIT KMDKASIVGD AVLYVQDLQM  180
HAKKLNAEIA SLEASLAGAD EHMGYLQGST KTKNKKKVSD NNHFVSKGII QIDVSQVEEK  240
GFYVKVACNK GQGVATALYK ALESLACFNV QSSNLNTILA DRFELAFTLN VKDCEQAIIN  300
SPNLKHWVAG AFLNQGFVI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G28160.14e-91bHLH family protein