PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP020754.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family GeBP
Protein Properties Length: 177aa    MW: 19922.1 Da    PI: 9.8653
Description GeBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP020754.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF57330.41.1e-094395998
       DUF573 59 rrLKkKfkkkvkkaksgkepsfskehdqkifelskkiWgs 98
                 rrLKkK++  ++    g++p+fsk+h+ k+fel+kkiWgs
  PCP020754.1  4 RRLKKKYQAGED----GEDPVFSKPHELKCFELCKKIWGS 39
                 9******97655....5*********************95 PP
Sequence ? help Back to Top
Protein Sequence    Length: 177 aa     Download sequence    
MICRRLKKKY QAGEDGEDPV FSKPHELKCF ELCKKIWGSE ANGLDSNVKG GKRKPPRKNN  60
KVNTDTVLAL PVSDASVKKE VQDNVTNRGV KADPDDFWSK YPCLSGSLRT GNCAPRSDLT  120
RLLIEKMPSL VGSSKAKELE ERWRALQLIE MDLSVKKLDL MQEQTKLVLD SMKSLKS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G00390.14e-08GeBP family protein