PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP020785.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family Trihelix
Protein Properties Length: 232aa    MW: 25976 Da    PI: 5.1276
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP020785.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix88.29.1e-2844137186
     trihelix   1 rWtkqevlaLiearremeerlrrgk........lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 
                  rWt+qe+l+Li+++r+ e r + ++        + +p+W++vs++++++g++r+p+qC+++w+nl++++kki+e+e +r++e++s +++ ++l+
  PCP020785.1  44 RWTRQEILVLINGKRYAEGRGGVRAprsdfgsgQLEPKWAAVSNYCKKHGVNREPVQCRKRWSNLAGDFKKIREWEAQRKDETESYWVMRNDLR 137
                  8*******************996433455666699******************************************************99986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 232 aa     Download sequence    
MVMASVQQVT LIPVDGESNG VDARNPTSAD TGGDDSSKAP RLPRWTRQEI LVLINGKRYA  60
EGRGGVRAPR SDFGSGQLEP KWAAVSNYCK KHGVNREPVQ CRKRWSNLAG DFKKIREWEA  120
QRKDETESYW VMRNDLRRER KLPGFFDKEV YDIMEAVPGT PVTLALPGPN RVESEEVKEE  180
GTAEEAENLF DSIQRPTEEG LFSDDESGRS PEKEVRFKEG PGISAPLPIS AK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G33550.17e-67Trihelix family protein