PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP020788.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family C2H2
Protein Properties Length: 233aa    MW: 25620 Da    PI: 9.8171
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP020788.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H217.21.4e-05118140123
                  EEETTTTEEESSHHHHHHHHHHT CS
      zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                  ++C+ C+k +  +s+ k H++t+
  PCP020788.1 118 WQCERCSKKYAVQSDWKAHMKTC 140
                  58*******************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 233 aa     Download sequence    
MVRFSGVVLV LMVSLLLAST GVQSPASSPA KSPALSPKQA PAAPSPSSTA PSSSPSSSPV  60
QLGEVTEEEL KQRTSKEVRK RVYVCPETSC VHNNPTQALG DLTGIKKHFC RKHGEKKWQC  120
ERCSKKYAVQ SDWKAHMKTC KYYRAFECGF ETAEERKQQQ WRSRVGEWRP GLGRHSRSTR  180
PDGHGAKIAE MEAASTGEAA RLGATLETVK GELAHLKREH EKEKESWEAA SGS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G03840.28e-41C2H2 family protein