PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP021017.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

HD-ZIP

Protein Properties

Length: 221aa MW: 24924.3 Da PI: 8.9723

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP021017.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	61.1	1.7e-19	72	126	2	56
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 rk+ ++tkeq + Lee F+++++++ +++e LA++l+L rqV vWFqNrRa+ k PCP021017.1 72 RKKLRLTKEQSRLLEESFRQHHTLNPKQKEALAMQLKLRPRQVEVWFQNRRARSK 126 78889************************************************98 PP
2	HD-ZIP_I/II	119.4	1.9e-38	72	160	1	89
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLre 89 +kk+rl+keq++lLEesF+++++L+p++K++la +L+l+prqv+vWFqnrRAR k+kq+E+++e+Lkr++ +l+e+n+rL++ev+eLr+ PCP021017.1 72 RKKLRLTKEQSRLLEESFRQHHTLNPKQKEALAMQLKLRPRQVEVWFQNRRARSKLKQTEMECEYLKRWFGSLTEQNRRLQREVKELRA 160 69*************************************************************************************94 PP

Sequence ? help Back to Top
Protein Sequence Length: 221 aa Download sequence
MAVLPTAMAM GSSSLELTIS VPGFSSYPSF LNSSVRDLDI NQVPSLQGDQ EEWMTAGMED 60 EEESSNGSGP PRKKLRLTKE QSRLLEESFR QHHTLNPKQK EALAMQLKLR PRQVEVWFQN 120 RRARSKLKQT EMECEYLKRW FGSLTEQNRR LQREVKELRA MKVGPPTVLS PHSCDPLPAS 180 TLTMCPRCER VTTTTNFDRD TVSGPTKTNH ISAAAATTLS S

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	121	129	RRARSKLKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G01430.1	6e-81	HD-ZIP family protein