PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP021091.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family ERF
Protein Properties Length: 253aa    MW: 28736 Da    PI: 5.2082
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP021091.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP258.41.7e-18107156355
          AP2   3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                  y+GVr+++ +g+++AeIrd + ng   r++lg+f+++e Aa a+++a+ +l+g
  PCP021091.1 107 YRGVRRRP-WGKYAAEIRDSTRNG--IRVWLGTFDSPEAAALAYDQAAFALRG 156
                  9*******.**********44465..*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 253 aa     Download sequence    
MEMESAFFQF SSPSDFSSDS SFGSLDSFSW DDESLQLPFN SHELMNFSPF SINDSQDTLL  60
HDVVARSAKQ TFVAQNEANN FNRVKEEEVT SANNQTLEEK STKEKAYRGV RRRPWGKYAA  120
EIRDSTRNGI RVWLGTFDSP EAAALAYDQA AFALRGSLAV LNFPAQVVQE SLQEIKYRHD  180
EACSPVIALK RRHSMKRKSM HKKCNKLVSQ CTDQRKVNEV LPQNVMVLED LGVEYLEELL  240
DISSSGSNNW CLQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23240.14e-57ERF family protein