PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP021104.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family LBD
Protein Properties Length: 203aa    MW: 22245.3 Da    PI: 6.5003
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP021104.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF260651.8e-20770163
       DUF260  1 aCaaCkvlrrkCakdCvlapyfpaeq.pkkfanvhklFGasnvlkllkalpeeeredamsslvy 63
                 +C aCk+lrrkC+++C++apyf++eq + +f ++hk+FGasn +kll++lp    ++ ++sl  
  PCP021104.1  7 PCGACKFLRRKCVRGCIFAPYFCHEQgATHFSAIHKVFGASNASKLLAHLPVVSLQAQLDSLKD 70
                 7*************************89**********************99988888888765 PP
Sequence ? help Back to Top
Protein Sequence    Length: 203 aa     Download sequence    
MTGSGSPCGA CKFLRRKCVR GCIFAPYFCH EQGATHFSAI HKVFGASNAS KLLAHLPVVS  60
LQAQLDSLKD QAAQSFLKGS AVANPNEKFY GKAPSHAEVH SWFHELESSS NTFPQFNSNH  120
TNDAGTTSYY ENGMMNSNNS VNGSHENSVN IPDENVSSYG SFEEGTSHSM SSFDVQTNYN  180
KQWGFHDANE LQSVAFSYID QHS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G42440.18e-39LBD family protein