PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP021106.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family C2H2
Protein Properties Length: 203aa    MW: 23009.9 Da    PI: 6.0308
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP021106.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H213.40.000223658123
                 EEETTTTEEESSHHHHHHHHHHT CS
      zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                 y+C  C++ F++   L  H++ H
  PCP021106.1 36 YECVFCKRGFTTAQALGGHMNIH 58
                 99*******************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 203 aa     Download sequence    
MESNHPDHQD SKTSSTDEEA EYRRDVNDDM GTGRSYECVF CKRGFTTAQA LGGHMNIHRR  60
ERAKTRPSSD PTNLASSTSK AVEDQSHPRA AVYHAIQSYP PHYFIAPPDD HMNYRTYVPA  120
PNTSGVLRPP HANHISDEDL CARNYFPRHR NLLRDDHQDW RSGSSSSLGM GRPSDDYKER  180
VFNGGSEEAD DELDLELRLG HDP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G43540.12e-13C2H2 family protein