PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP021193.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family bHLH
Protein Properties Length: 359aa    MW: 39788 Da    PI: 4.5552
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP021193.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH11.30.000653083471054
                  HHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
          HLH  10 rrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                  + R ++i++ ++ L+ ++P      ++  + + +L +A++Y+ksL
  PCP021193.1 308 KMRKEKIRETINILQNIIPDG----KG-KDAIVVLDEAIHYLKSL 347
                  78999**************97....23.46699**********99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 359 aa     Download sequence    
MGEDFGAWIP QQHLGWQPPD PNAMGAQHGL GQQNFITAYG KPGTNMLLTN GTMPPYASSE  60
LPQPQVGRPN EPKGWFYCLP RIRQAFMPAT DNGLKEKVSS ACHESTGGTF IPYTDSAFEQ  120
KRLLVNNPSG YQTTLVFSSE IVNPLQCHTS WNPYQQGAYY LDGDDPRNER DFKNLSGAVL  180
TDEFKGNDEC GAESEMHEDT EELNALLYSD GDSDYTEDDE VTSTGHSPST MTVHDKQNWF  240
EEVASSDGMN KKRKLFDGGN DDVPSVMDTA SPMKHNRSLE LEDDAESSCA CNRSSGLREV  300
DSLSSNKKMR KEKIRETINI LQNIIPDGKG KDAIVVLDEA IHYLKSLKLK AKAFGLDSL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G33880.13e-09bHLH family protein