PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP021344.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family ERF
Protein Properties Length: 399aa    MW: 44752.9 Da    PI: 5.8058
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP021344.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP237.36.9e-122362771155
          AP2  11 krgrWvAeIrd.psengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                  + g+WvAeIr        + +r +lg+f t +eAa a++a ++kl+g
  PCP021344.1 236 RGGKWVAEIRKpH-----CgARLWLGTFNTSYEAALAYDATARKLYG 277
                  569********44.....68*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 399 aa     Download sequence    
MIQLLSKGVF VSSEVSIYSL KLNSWKRIKN LPRNDFSTLN VYNTALVFSN GALCWLMPNR  60
LDMYRFIILT LDLATEKYRE FDTLVDEDYS TVMELEVLGG SLCVSVHDWD TGNDVWIMKD  120
FGGPWTLLYS IKKETMTWLL NYCPPLVFAK NGEIVLLKKD EEAFVWFDLR GKIGYQYNIC  180
GLPLHFDAKI YEGSLCLIDG DPVVEDHGIF GAGELVDGNC WETLHLIEAW ASGKGRGGKW  240
VAEIRKPHCG ARLWLGTFNT SYEAALAYDA TARKLYGAQA KLNLPDQQAP KYHQHQLNQH  300
LQHQVFRSSA NPGMPPQIPN QTLVQNNLSG TGTNPACYAA PVKDIAAPVI YNNSANVKVD  360
QHPGNYNSRR AENQPEQGGM KVEENMSSGV NNEGMDGIF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75490.11e-19ERF family protein