PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP021391.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family NF-YB
Protein Properties Length: 153aa    MW: 16170 Da    PI: 7.2574
Description NF-YB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP021391.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YB177.71.1e-5533126194
        NF-YB   1 vreqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrele 94 
                  vreqdr+lPian+srimkk+lP+n+ki+kdak+tvqecvsefisfvtseasdkcq+ekrktingddllwa+atlGfedy+epl++yl++yre +
  PCP021391.1  33 VREQDRYLPIANISRIMKKALPTNGKIAKDAKDTVQECVSEFISFVTSEASDKCQKEKRKTINGDDLLWAMATLGFEDYIEPLRIYLSRYREGD 126
                  69*****************************************************************************************965 PP
Sequence ? help Back to Top
Protein Sequence    Length: 153 aa     Download sequence    
MAEAPTSPAG GSHESGGEQS PQRGGGGGGG SSVREQDRYL PIANISRIMK KALPTNGKIA  60
KDAKDTVQEC VSEFISFVTS EASDKCQKEK RKTINGDDLL WAMATLGFED YIEPLRIYLS  120
RYREGDAKGS ARGGDGSFKG NAVPAMPGPS SQV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G38880.73e-70NF-YB family protein