PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP021554.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family LFY
Protein Properties Length: 440aa    MW: 48711.1 Da    PI: 7.7227
Description LFY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP021554.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FLO_LFY630.52.7e-192344261386
      FLO_LFY   1 mdpeafsaslfkwdpraaaaapparlleeaavseapleaaaaaaarklr........eleelfkayGvryltvakiaelGftvstLvdmkdeelddlm 90 
                  mdp+afsa+lfkw  r ++  p++r++ eaav++a+ +aaaaaa ++lr        +le+lf+ayGvry+t+akiaelGftv+tL+dmkd+eldd+m
  PCP021554.1  34 MDPDAFSANLFKWGLRGMV-VPTNRVQLEAAVPPAA-AAAAAAAGCTLRppgelglgGLEDLFQAYGVRYYTAAKIAELGFTVKTLLDMKDDELDDMM 129
                  9*************99776.6788999999887776.66666777778889999999***************************************** PP

      FLO_LFY  91 kslseifrldllvGeryGikaavraerrrleeeeaekkrrkllsedeet.aldalsqeglseepvqeekeaagsggeglgeaelvaaeekkseeekkk 187
                  +sls+ifr++llvGeryGikaavraerrrl+ee+  ++rr+ +s d++t aldalsqeglseepvq+eke++gsgg+   ++e+++a e++++++++k
  PCP021554.1 130 SSLSQIFRWELLVGERYGIKAAVRAERRRLDEED--SRRRNPVSGDTTTnALDALSQEGLSEEPVQQEKEMVGSGGGA--TWEVATAGERRKKQRRMK 223
                  ********************************88..77777898887766************************9998..899999888766666666 PP

      FLO_LFY 188 askkkqkrkkkkelkse.ededeeeeededeegsgedge...erqrehPfivtepgevargkknGLDYLfdLyeqCrefLlqvqkiakerGekcPtkv 281
                  +   k+     +++++  +ded+++ +d  + g+g +g    erqrehPfivtepgevargkknGLDYLf+LyeqCr+fL+qvq+iakerGekcPtkv
  PCP021554.1 224 KGPFKNCSAGGRHNNEGvDDEDDNDMDDMTGYGNGGGGGmlgERQREHPFIVTEPGEVARGKKNGLDYLFHLYEQCRDFLIQVQNIAKERGEKCPTKV 321
                  655555555444433332555666666666666555554577******************************************************** PP

      FLO_LFY 282 tnqvfryakkagasyinkPkmrhYvhCYalhcLdeeasnalrrafkergenvGawrqacykplvaiaarqgwdidavfnahprLsiWYvPtkLrqLCh 379
                  tnqvfryakkagasyinkPkmrhYvhCYalhcLdeeasnalrr fkergenvGawrqacykplvaiaa qgwdida+fn+h rLsiWYvPtkLrqLCh
  PCP021554.1 322 TNQVFRYAKKAGASYINKPKMRHYVHCYALHCLDEEASNALRRGFKERGENVGAWRQACYKPLVAIAAGQGWDIDAIFNSHCRLSIWYVPTKLRQLCH 419
                  ************************************************************************************************** PP

      FLO_LFY 380 lerskas 386
                  +er++a+
  PCP021554.1 420 AERNNAT 426
                  ****986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 440 aa     Download sequence    
MNKNRLAFMG TEHYKLPQKI VSVHIVLCGV VENMDPDAFS ANLFKWGLRG MVVPTNRVQL  60
EAAVPPAAAA AAAAAGCTLR PPGELGLGGL EDLFQAYGVR YYTAAKIAEL GFTVKTLLDM  120
KDDELDDMMS SLSQIFRWEL LVGERYGIKA AVRAERRRLD EEDSRRRNPV SGDTTTNALD  180
ALSQEGLSEE PVQQEKEMVG SGGGATWEVA TAGERRKKQR RMKKGPFKNC SAGGRHNNEG  240
VDDEDDNDMD DMTGYGNGGG GGMLGERQRE HPFIVTEPGE VARGKKNGLD YLFHLYEQCR  300
DFLIQVQNIA KERGEKCPTK VTNQVFRYAK KAGASYINKP KMRHYVHCYA LHCLDEEASN  360
ALRRGFKERG ENVGAWRQAC YKPLVAIAAG QGWDIDAIFN SHCRLSIWYV PTKLRQLCHA  420
ERNNATASSS ASGGGDHLPY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G61850.11e-128LFY family protein